Stigmatella aurantiaca

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Archangiaceae

Genus

Stigmatella

Description

Stigmatella aurantiaca is a bacterium characterized by its single replicon and a genome accession number of FOAP00000000.1. This species is part of the microbial community and exhibits traits significant for its classification and potential applications in biotechnology. The simplicity of having one replicon may suggest a streamlined genetic organization, which could facilitate genetic studies and manipulation. The genome of Stigmatella aurantiaca may harbor unique metabolic pathways or gene clusters that could be of interest for research aimed at understanding microbial interactions in various environments. While specific ecological roles or interactions are not detailed, the presence of such a microorganism within its habitat potentially contributes to key biogeochemical cycles. Given its distinct genomic traits, Stigmatella aurantiaca may serve as a model organism for investigating the evolutionary adaptations of bacteria in response to environmental pressures. This feature not only emphasizes its biological significance but also highlights the potential for further exploration of its physiological capabilities.

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyArchangiaceae
GenusStigmatella
SpeciesStigmatella aurantiaca
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stigmatella aurantiaca strain DSM 17044 genome assembly, contig:

Gene Summary

Adenine Count

1440712 bp

Thymine Count

1448846 bp

Guanine Count

3246537 bp

Cytosine Count

3229672 bp

Genome Length

9365767 bp

Protein-coding Genes

7403 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-arabinose abc transporter membrane proteinSAMN05444354_11179Not AvailableNegative5266491 - 526744132812.5
monosaccharide abc transporter atp-binding protein, cut2 familySAMN05444354_11180Not AvailableNegative5267453 - 526895254110.6
l-arabinose-binding proteinSAMN05444354_11181Not AvailableNegative5268975 - 526996134981.2
23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferaseSAMN05444354_11182Not AvailableNegative5270038 - 527077826387.2
1-deoxy-d-xylulose-5-phosphate synthaseSAMN05444354_11183Not AvailableNegative5270775 - 527252660840.7
geranylgeranyl diphosphate synthase, type iiSAMN05444354_11184Not AvailableNegative5272523 - 527341631014.2
response regulator receiver domain-containing proteinSAMN05444354_11185Not AvailableNegative5273413 - 527382615573.7
exodeoxyribonuclease vii small subunitSAMN05444354_11186Not AvailableNegative5273850 - 527419112245.4
exodeoxyribonuclease vii large subunitSAMN05444354_11187Not AvailableNegative5274258 - 527599462425.4
inner membrane component of t3ss domain-containing proteinSAMN05444354_11188Not AvailableNegative5275991 - 527773662697.8

Displaying genes 4171 – 4180 of 7456 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0012349penigequinolone AC27H33NO6Chemical structure of penigequinolone ANot available
Average467.562Da
Monoisotopic467.230787787Da
BASm0014096Cyclic AMPC10H12N5O6PChemical structure of Cyclic AMPNULL
Average329.2059Da
Monoisotopic329.052519653Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039803Acinetobacter baumannii AB307-0294Not availableNot availableNot available
BASm0040037Clostridium sticklandii DSM 519Not availableNot availableNot available
BASm0040520Streptomyces abikoensisNot availableNot availableNot available

Displaying 1–8 of 8 metabolites

Health Effects

No health effects information available for this bacterium.