Shewanella baltica

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella baltica is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This microbe is recognized for its heterotrophic metabolism, utilizing organic compounds as its energy source, which allows it to thrive in diverse habitats. Furthermore, S. baltica is classified as a facultative anaerobe, enabling it to adapt to varying oxygen conditions by switching between aerobic respiration and fermentation depending on the availability of oxygen in its environment. The versatility of S. baltica in energy acquisition and oxygen utilization suggests that it plays a significant role in biogeochemical cycles, particularly in marine and sedimentary ecosystems. Its ability to metabolize a wide range of organic substrates may contribute to the degradation of complex organic matter, thereby influencing nutrient cycling and ecosystem dynamics. This adaptability not only highlights the ecological significance of S. baltica but also underscores its potential applications in bioremediation and environmental biotechnology. Understanding the functional traits of S. baltica within its ecological contexts can provide insights into microbial interactions and the resilience of microbial communities in fluctuating environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella baltica
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shewanella baltica
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Shewanella baltica

Accession NumberNZ_LR134321.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4152 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaEL185_RS00005Not Available+1 - 138952148.4
dna polymerase iii subunit betaEL185_RS00010Not Available+1409 - 250940950.3
dna replication/repair protein recfEL185_RS00015Not Available+2711 - 379340627.7
dna topoisomerase (atp-hydrolyzing) subunit bEL185_RS00020Not Available+3810 - 622790036.1
glutathione s-transferase family proteinEL185_RS00025Not Available-6312 - 697424568.2
c-type cytochromeEL185_RS00030Not Available+7215 - 751711459.0
sulfite oxidaseEL185_RS00035Not Available+7519 - 874545216.1
hypothetical proteinEL185_RS00040Not Available+8745 - 912814388.4
c-type cytochromeEL185_RS00045Not Available+9125 - 946012010.5
biotin-dependent carboxyltransferase family proteinEL185_RS00050Not Available-9551 - 1047133354.0

Displaying genes 1 – 10 of 9016 in total

Pathways

23 pathways

Metabolites

143 records
Metabolite IDMetabolite nameStructureCAS number
BASm0008404(indol-3-yl)acetyl-L-aspartateC14H12N2O5Chemical structure of (indol-3-yl)acetyl-L-aspartateNot available
Average288.26Da
Monoisotopic288.075718654Da
BASm0008427methanesulfinateCH3O2SChemical structure of methanesulfinateNot available
Average79.09Da
Monoisotopic78.985924091Da
BASm0008659propionate 3-nitronateC3H4NO4Chemical structure of propionate 3-nitronateNot available
Average118.069Da
Monoisotopic118.0145812Da
BASm0009321beta-D-fructose 1-phosphateC6H11O9PChemical structure of beta-D-fructose 1-phosphateNot available
Average258.12Da
Monoisotopic258.015166092Da
BASm0009430all-trans-4-oxoretinalC20H26O2Chemical structure of all-trans-4-oxoretinalNot available
Average298.426Da
Monoisotopic298.1932801Da
BASm00097922-hydroxydodecanoateC12H23O3Chemical structure of 2-hydroxydodecanoateNot available
Average215.314Da
Monoisotopic215.1652682Da
BASm00097952,3-dihydroxydodecanoateC12H23O4Chemical structure of 2,3-dihydroxydodecanoateNot available
Average231.313Da
Monoisotopic231.1601828Da
BASm00097983-hydroxybutane-1,2,3-tricarboxylateC7H7O7Chemical structure of 3-hydroxybutane-1,2,3-tricarboxylateNot available
Average203.128Da
Monoisotopic203.0208233Da
BASm00106538-oxo-GMPC10H12N5O9PChemical structure of 8-oxo-GMPNot available
Average377.207Da
Monoisotopic377.038361144Da
BASm00107383-phosphoshikimateC7H8O8PChemical structure of 3-phosphoshikimateNot available
Average251.108Da
Monoisotopic250.997324955Da

Displaying 131–140 of 143 metabolites