Shewanella baltica

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella baltica is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This microbe is recognized for its heterotrophic metabolism, utilizing organic compounds as its energy source, which allows it to thrive in diverse habitats. Furthermore, S. baltica is classified as a facultative anaerobe, enabling it to adapt to varying oxygen conditions by switching between aerobic respiration and fermentation depending on the availability of oxygen in its environment. The versatility of S. baltica in energy acquisition and oxygen utilization suggests that it plays a significant role in biogeochemical cycles, particularly in marine and sedimentary ecosystems. Its ability to metabolize a wide range of organic substrates may contribute to the degradation of complex organic matter, thereby influencing nutrient cycling and ecosystem dynamics. This adaptability not only highlights the ecological significance of S. baltica but also underscores its potential applications in bioremediation and environmental biotechnology. Understanding the functional traits of S. baltica within its ecological contexts can provide insights into microbial interactions and the resilience of microbial communities in fluctuating environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella baltica
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shewanella baltica
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Shewanella baltica

Accession NumberNZ_LR134321.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4152 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
xaa-pro dipeptidaseEL185_RS00105Not Available+25435 - 2675750121.6
yigz family proteinEL185_RS00110Not Available+26785 - 2739922352.8
trkh family potassium uptake proteinEL185_RS00115Not Available+27477 - 2893453168.0
menaquinone-dependent protoporphyrinogen ix dehydrogenaseEL185_RS00120Not Available+28937 - 2946120048.3
arsr/smtb family transcription factorEL185_RS00125Not Available-29525 - 2983311389.9
menaquinone-dependent protoporphyrinogen ix dehydrogenaseEL185_RS00130Not Available+30034 - 3058520587.9
trkh family potassium uptake proteinEL185_RS00135Not Available-30656 - 3209852841.4
trk system potassium transporter trkaEL185_RS00140Not Available-32119 - 3352851403.9
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbEL185_RS00145Not Available-33544 - 3483047917.5
methionyl-trna formyltransferaseEL185_RS00150Not Available-34832 - 3578834442.3

Displaying genes 21 – 30 of 9016 in total

Pathways

23 pathways

Metabolites

143 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002113L-threitolC4H10O4Chemical structure of L-threitolNot available
Average122.1198Da
Monoisotopic122.0579088Da
BASm0002131(3S)-hydroxy-3-methylglutaryl-CoAC27H39N7O20P3SChemical structure of (3S)-hydroxy-3-methylglutaryl-CoANot available
Average906.62Da
Monoisotopic906.1183419Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002198beta-D-ribofuranoseC5H10O5Chemical structure of beta-D-ribofuranose50-69-1
Average150.1299Da
Monoisotopic150.05282343Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da
BASm00026033-hydroxy-2-methylpropanoyl-CoAC25H38N7O18P3SChemical structure of 3-hydroxy-2-methylpropanoyl-CoANot available
Average849.59Da
Monoisotopic849.1228839Da
BASm00026123-oxohexadecanoyl-CoAC37H64N7O18P3SChemical structure of 3-oxohexadecanoyl-CoANot available
Average1019.926Da
Monoisotopic1019.324139Da

Displaying 31–40 of 143 metabolites