Mesorhizobium opportunistum WSM2075

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Mesorhizobium

Description

Mesorhizobium opportunistum WSM2075.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusMesorhizobium
SpeciesMesorhizobium opportunistum
StrainWSM2075

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Biserrula pelecinus L
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mesorhizobium opportunistum WSM2075

Accession NumberNC_015675.1

Gene Summary

Adenine Count

1275452 bp

Thymine Count

1280917 bp

Guanine Count

2181706 bp

Cytosine Count

2146369 bp

Genome Length

6884444 bp

Protein-coding Genes

6615 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phage head-tail joining proteinMESOP_RS18530Not Available+3845926 - 38461478108.69
Portal proteinMESOP_RS18535Not Available+3846147 - 384769156256.8
Prohead proteaseMESOP_RS18540P03711+3847681 - 384858931683.0
hypothetical proteinMESOP_RS18545Not Available+3848673 - 384915816744.8
head decoration proteinMESOP_RS18550Not Available+3849219 - 384954811120.2
Major capsidMESOP_RS18555Not Available+3849611 - 385063637095.1
Hypothetical proteinMESOP_RS33025Not Available+3850641 - 3853487105128.0
AttrNot AvailableNot Available+3854920 - 3854937Not Available
chromosomal replication initiator protein dnaaMESOP_RS00005Q98BG9+675 - 221957498.4
dna polymerase iii subunit betaMESOP_RS00010P0CAU5+2525 - 364340386.3

Displaying genes 41 – 50 of 6698 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

396 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0006661UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosamineC43H75N3O20P2Chemical structure of UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosamineNot available
Average1016.0112Da
Monoisotopic1015.441915Da
BASm0006671UDP-2-acetamido-3-dehydro-2-deoxy-alpha-D-glucopyranoseC17H23N3O17P2Chemical structure of UDP-2-acetamido-3-dehydro-2-deoxy-alpha-D-glucopyranoseNot available
Average603.324Da
Monoisotopic603.051367448Da
BASm00068103-(methylsulfanyl)propanoyl-CoAC25H38N7O17P3S2Chemical structure of 3-(methylsulfanyl)propanoyl-CoANot available
Average865.65Da
Monoisotopic865.1000405Da
BASm0006824isatinateC8H6NO3Chemical structure of isatinateNot available
Average164.141Da
Monoisotopic164.035316637Da
BASm0006825indole-3-propanoateC11H10NO2Chemical structure of indole-3-propanoateNot available
Average188.207Da
Monoisotopic188.071702146Da
BASm00069333,6-anhydro-L-galactonateC6H9O6Chemical structure of 3,6-anhydro-L-galactonateNot available
Average177.133Da
Monoisotopic177.0404616Da
BASm0006988(25S)-3-oxocholest-4-en-26-oyl-CoAC48H72N7O18P3SChemical structure of (25S)-3-oxocholest-4-en-26-oyl-CoANot available
Average1160.12Da
Monoisotopic1159.388934994Da
BASm0007001UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamateC28H39N5O23P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamateNot available
Average875.582Da
Monoisotopic875.1533009Da
BASm0007003UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioateC35H51N7O26P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioateNot available
Average1047.7583Da
Monoisotopic1047.235898Da
BASm00070682-epi-5-epi-valioloneC7H12O6Chemical structure of 2-epi-5-epi-valioloneNot available
Average192.167Da
Monoisotopic192.063388106Da

Displaying 291–300 of 396 metabolites