Xylella fastidiosa Temecula1

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Xanthomonadales

Family

Xanthomonadaceae

Genus

Xylella

Description

Xylella fastidiosa Temecula1 is a Gram-negative, rod-shaped bacterium characterized by its single-cell arrangement and absence of motility, despite possessing true flagella. This microbe features a unique structure with two cellular membranes, indicative of a typical Gram-negative cell envelope. It is classified as an aerobe, thriving optimally at a temperature of 26°C within a mesophilic range. Xylella fastidiosa Temecula1 is host-associated and exhibits a free-living biotic relationship, suggesting its adaptability to different environments while relying on host interactions for survival. Notably, this strain does not demonstrate pathogenicity, indicating it does not cause disease in its host or surrounding ecosystems. The genomic structure of Xylella fastidiosa Temecula1 consists of three replicons, with genome accessions NC_004556, NC_004554.1, and NC_004556.1 providing a basis for further genetic and functional studies. Understanding the traits of Xylella fastidiosa Temecula1 can offer insights into the ecological dynamics of microbial communities associated with host plants, potentially influencing plant health and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderXanthomonadales
FamilyXanthomonadaceae
GenusXylella
Speciesfastidiosa
StrainTemecula1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa Temecula1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Xylella fastidiosa Temecula1 plasmid pXFPD1.3, complete sequence.

Gene Summary

Adenine Count

224 bp

Thymine Count

398 bp

Guanine Count

390 bp

Cytosine Count

334 bp

Genome Length

1346 bp

Protein-coding Genes

1 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Abc transporterPD_RS01900Q87EF0Positive450846 - 45259464187.6
tetraacyldisaccharide 4'-kinasePD_RS01905B2I804Positive452591 - 45361038320.3
AttlNot AvailableNot AvailablePositive453721 - 453732Not Available
Phage-related tail proteinPD_RS01910Not AvailableNegative454017 - 45471825600.5
Putative phage tail fiber proteinPD_RS01915Not AvailableNegative454741 - 45560730559.9
Phage-related tail proteinPD_RS01920Not AvailableNegative455615 - 45617220603.0
Phage-related baseplate assembly proteinPD_RS01925Not AvailableNegative456165 - 45705832150.3
Phage-related baseplate assembly proteinPD_RS01930P51768Negative457058 - 45739612255.0
Plasmid maintenance system killer higbPD_RS01935Not AvailablePositive457594 - 45787510639.8
Putative xre family plasmid maintenance system antidote proteinPD_RS01940P37371Positive457886 - 45816110073.3

Displaying genes 1 – 10 of 4546 in total

Metabolites

1617 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017290N-Acetyl-D-mannosamine 6-phosphateC8H16NO9PChemical structure of N-Acetyl-D-mannosamine 6-phosphate873185-52-5
Average301.1877Da
Monoisotopic301.056267627Da
BASm0017296Guanosine diphosphate mannoseC16H25N5O16P2Chemical structure of Guanosine diphosphate mannose3123-67-9
Average605.3411Da
Monoisotopic605.077152801Da
BASm0017299Nicotinic acid adenine dinucleotideC21H27N6O15P2Chemical structure of Nicotinic acid adenine dinucleotide6450-77-7
Average665.4178Da
Monoisotopic665.100962248Da
BASm00173035-Aminoimidazole ribonucleotideC8H14N3O7PChemical structure of 5-Aminoimidazole ribonucleotide25635-88-5
Average295.1864Da
Monoisotopic295.056936329Da
BASm00173085'-Phosphoribosyl-N-formylglycineamideC8H15N2O9PChemical structure of 5'-Phosphoribosyl-N-formylglycineamideNULL
Average314.1865Da
Monoisotopic314.0515166Da
BASm0017310dTDP-D-GlucoseC16H26N2O16P2Chemical structure of dTDP-D-Glucose2196-62-5
Average564.329Da
Monoisotopic564.075755818Da
BASm0017313GDP-4-Dehydro-6-deoxy-D-mannoseC16H23N5O15P2Chemical structure of GDP-4-Dehydro-6-deoxy-D-mannose18186-48-6
Average587.3258Da
Monoisotopic587.066588115Da
BASm00173165,10-Methylene-THFC20H23N7O6Chemical structure of 5,10-Methylene-THF31690-11-6
Average457.4399Da
Monoisotopic457.170981503Da
BASm00173214,6-Dideoxy-4-oxo-dTDP-D-glucoseC16H24N2O15P2Chemical structure of 4,6-Dideoxy-4-oxo-dTDP-D-glucoseNULL
Average546.3137Da
Monoisotopic546.065191132Da
BASm0017326Undecaprenyl diphosphateC55H92O7P2Chemical structure of Undecaprenyl diphosphate23-13-2
Average927.2623Da
Monoisotopic926.631828322Da

Displaying 71–80 of 1617 metabolites

Health Effects

No health effects information available for this bacterium.