Xylella fastidiosa Temecula1

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Xanthomonadales

Family

Xanthomonadaceae

Genus

Xylella

Description

Xylella fastidiosa Temecula1 is a Gram-negative, rod-shaped bacterium characterized by its single-cell arrangement and absence of motility, despite possessing true flagella. This microbe features a unique structure with two cellular membranes, indicative of a typical Gram-negative cell envelope. It is classified as an aerobe, thriving optimally at a temperature of 26°C within a mesophilic range. Xylella fastidiosa Temecula1 is host-associated and exhibits a free-living biotic relationship, suggesting its adaptability to different environments while relying on host interactions for survival. Notably, this strain does not demonstrate pathogenicity, indicating it does not cause disease in its host or surrounding ecosystems. The genomic structure of Xylella fastidiosa Temecula1 consists of three replicons, with genome accessions NC_004556, NC_004554.1, and NC_004556.1 providing a basis for further genetic and functional studies. Understanding the traits of Xylella fastidiosa Temecula1 can offer insights into the ecological dynamics of microbial communities associated with host plants, potentially influencing plant health and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderXanthomonadales
FamilyXanthomonadaceae
GenusXylella
Speciesfastidiosa
StrainTemecula1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa Temecula1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Xylella fastidiosa Temecula1 plasmid pXFPD1.3, complete sequence.

Gene Summary

Adenine Count

224 bp

Thymine Count

398 bp

Guanine Count

390 bp

Cytosine Count

334 bp

Genome Length

1346 bp

Protein-coding Genes

1 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Abc transporterPD_RS01900Q87EF0Positive450846 - 45259464187.6
tetraacyldisaccharide 4'-kinasePD_RS01905B2I804Positive452591 - 45361038320.3
AttlNot AvailableNot AvailablePositive453721 - 453732Not Available
Phage-related tail proteinPD_RS01910Not AvailableNegative454017 - 45471825600.5
Putative phage tail fiber proteinPD_RS01915Not AvailableNegative454741 - 45560730559.9
Phage-related tail proteinPD_RS01920Not AvailableNegative455615 - 45617220603.0
Phage-related baseplate assembly proteinPD_RS01925Not AvailableNegative456165 - 45705832150.3
Phage-related baseplate assembly proteinPD_RS01930P51768Negative457058 - 45739612255.0
Plasmid maintenance system killer higbPD_RS01935Not AvailablePositive457594 - 45787510639.8
Putative xre family plasmid maintenance system antidote proteinPD_RS01940P37371Positive457886 - 45816110073.3

Displaying genes 1 – 10 of 4546 in total

Metabolites

1617 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017269PA(16:0/16:0)C35H69O8PChemical structure of PA(16:0/16:0)7091-44-3
Average648.903Da
Monoisotopic648.47300618Da
BASm0017273N10-Formyl-THFC20H23N7O7Chemical structure of N10-Formyl-THF2800-34-2
Average473.4393Da
Monoisotopic473.165896125Da
BASm0017275S-AdenosylmethioninamineC14H23N6O3SChemical structure of S-Adenosylmethioninamine22365-13-5
Average355.436Da
Monoisotopic355.155234322Da
BASm0017276PhosphoribosylformylglycineamidineC8H16N3O8PChemical structure of Phosphoribosylformylglycineamidine37721-04-3
Average313.2017Da
Monoisotopic313.067501015Da
BASm0017277Adenosine phosphosulfateC10H14N5O10PSChemical structure of Adenosine phosphosulfate485-84-7
Average427.284Da
Monoisotopic427.019898895Da
BASm0017282Dihydrofolic acidC19H21N7O6Chemical structure of Dihydrofolic acid4033-27-6
Average443.4133Da
Monoisotopic443.155331439Da
BASm00172855-MethylthioriboseC6H12O4SChemical structure of 5-Methylthioribose23656-67-9
Average180.222Da
Monoisotopic180.045629562Da
BASm0017286Octaprenyl diphosphateC40H68O7P2Chemical structure of Octaprenyl diphosphateNULL
Average722.9112Da
Monoisotopic722.444027554Da
BASm0017287CarbamoylphosphateCH4NO5PChemical structure of Carbamoylphosphate590-55-6
Average141.0199Da
Monoisotopic140.982708755Da
BASm00172883-AminopropionaldehydeC3H7NOChemical structure of 3-Aminopropionaldehyde352-92-1
Average73.0938Da
Monoisotopic73.052763851Da

Displaying 61–70 of 1617 metabolites

Health Effects

No health effects information available for this bacterium.