Xylella fastidiosa Temecula1

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Xanthomonadales

Family

Xanthomonadaceae

Genus

Xylella

Description

Xylella fastidiosa Temecula1 is a Gram-negative, rod-shaped bacterium characterized by its single-cell arrangement and absence of motility, despite possessing true flagella. This microbe features a unique structure with two cellular membranes, indicative of a typical Gram-negative cell envelope. It is classified as an aerobe, thriving optimally at a temperature of 26°C within a mesophilic range. Xylella fastidiosa Temecula1 is host-associated and exhibits a free-living biotic relationship, suggesting its adaptability to different environments while relying on host interactions for survival. Notably, this strain does not demonstrate pathogenicity, indicating it does not cause disease in its host or surrounding ecosystems. The genomic structure of Xylella fastidiosa Temecula1 consists of three replicons, with genome accessions NC_004556, NC_004554.1, and NC_004556.1 providing a basis for further genetic and functional studies. Understanding the traits of Xylella fastidiosa Temecula1 can offer insights into the ecological dynamics of microbial communities associated with host plants, potentially influencing plant health and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderXanthomonadales
FamilyXanthomonadaceae
GenusXylella
Speciesfastidiosa
StrainTemecula1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa Temecula1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Xylella fastidiosa Temecula1 plasmid pXFPD1.3, complete sequence.

Gene Summary

Adenine Count

224 bp

Thymine Count

398 bp

Guanine Count

390 bp

Cytosine Count

334 bp

Genome Length

1346 bp

Protein-coding Genes

1 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Abc transporterPD_RS01900Q87EF0Positive450846 - 45259464187.6
tetraacyldisaccharide 4'-kinasePD_RS01905B2I804Positive452591 - 45361038320.3
AttlNot AvailableNot AvailablePositive453721 - 453732Not Available
Phage-related tail proteinPD_RS01910Not AvailableNegative454017 - 45471825600.5
Putative phage tail fiber proteinPD_RS01915Not AvailableNegative454741 - 45560730559.9
Phage-related tail proteinPD_RS01920Not AvailableNegative455615 - 45617220603.0
Phage-related baseplate assembly proteinPD_RS01925Not AvailableNegative456165 - 45705832150.3
Phage-related baseplate assembly proteinPD_RS01930P51768Negative457058 - 45739612255.0
Plasmid maintenance system killer higbPD_RS01935Not AvailablePositive457594 - 45787510639.8
Putative xre family plasmid maintenance system antidote proteinPD_RS01940P37371Positive457886 - 45816110073.3

Displaying genes 1 – 10 of 4546 in total

Metabolites

1617 records
Metabolite IDMetabolite nameStructureCAS number
BASm0019883CL(14:0(3-OH)/16:0/16:0/16:0)C71H138O18P2Chemical structure of CL(14:0(3-OH)/16:0/16:0/16:0)NULL
Average1341.815Da
Monoisotopic1340.9358416Da
BASm0019885CL(14:0(3-OH)/16:1(9Z)/14:0/14:0)C67H128O18P2Chemical structure of CL(14:0(3-OH)/16:1(9Z)/14:0/14:0)NULL
Average1283.691Da
Monoisotopic1282.857591278Da
BASm0019886CL(14:0(3-OH)/17:0cycw7c/14:0(3-OH)/17:0cycw7c)C71H134O19P2Chemical structure of CL(14:0(3-OH)/17:0cycw7c/14:0(3-OH)/17:0cycw7c)NULL
Average1353.782Da
Monoisotopic1352.899456091Da
BASm0019887CL(14:0(3-OH)/17:0cycw7c/14:0/14:0)C68H130O18P2Chemical structure of CL(14:0(3-OH)/17:0cycw7c/14:0/14:0)NULL
Average1297.718Da
Monoisotopic1296.873241342Da
BASm0019888CL(14:0/12:0(3-OH)/14:0/12:0(3-OH))C61H118O19P2Chemical structure of CL(14:0/12:0(3-OH)/14:0/12:0(3-OH))NULL
Average1217.544Da
Monoisotopic1216.774255576Da
BASm0019889CL(14:0/14:0(3-OH)/14:0/14:0)C65H126O18P2Chemical structure of CL(14:0/14:0(3-OH)/14:0/14:0)NULL
Average1257.653Da
Monoisotopic1256.841941213Da
BASm0019890CL(15:0/10:0(3-OH)/15:0/10:0(3-OH))C59H114O19P2Chemical structure of CL(15:0/10:0(3-OH)/15:0/10:0(3-OH))NULL
Average1189.49Da
Monoisotopic1188.742955447Da
BASm0019891CL(15:0/12:0(3-OH)/15:0/12:0(3-OH))C63H122O19P2Chemical structure of CL(15:0/12:0(3-OH)/15:0/12:0(3-OH))NULL
Average1245.598Da
Monoisotopic1244.805555704Da
BASm0019892CL(15:0/14:0(3-OH)/14:0/14:0)C66H128O18P2Chemical structure of CL(15:0/14:0(3-OH)/14:0/14:0)NULL
Average1271.68Da
Monoisotopic1270.857591278Da
BASm0019893CL(15:0cyclo/10:0(3-OH)/15:0cyclo/10:0(3-OH))C59H110O19P2Chemical structure of CL(15:0cyclo/10:0(3-OH)/15:0cyclo/10:0(3-OH))NULL
Average1185.458Da
Monoisotopic1184.711655318Da

Displaying 1461–1470 of 1617 metabolites

Health Effects

No health effects information available for this bacterium.