Xylella fastidiosa Temecula1

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Xanthomonadales

Family

Xanthomonadaceae

Genus

Xylella

Description

Xylella fastidiosa Temecula1 is a Gram-negative, rod-shaped bacterium characterized by its single-cell arrangement and absence of motility, despite possessing true flagella. This microbe features a unique structure with two cellular membranes, indicative of a typical Gram-negative cell envelope. It is classified as an aerobe, thriving optimally at a temperature of 26°C within a mesophilic range. Xylella fastidiosa Temecula1 is host-associated and exhibits a free-living biotic relationship, suggesting its adaptability to different environments while relying on host interactions for survival. Notably, this strain does not demonstrate pathogenicity, indicating it does not cause disease in its host or surrounding ecosystems. The genomic structure of Xylella fastidiosa Temecula1 consists of three replicons, with genome accessions NC_004556, NC_004554.1, and NC_004556.1 providing a basis for further genetic and functional studies. Understanding the traits of Xylella fastidiosa Temecula1 can offer insights into the ecological dynamics of microbial communities associated with host plants, potentially influencing plant health and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderXanthomonadales
FamilyXanthomonadaceae
GenusXylella
Speciesfastidiosa
StrainTemecula1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa Temecula1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Xylella fastidiosa Temecula1 plasmid pXFPD1.3, complete sequence.

Gene Summary

Adenine Count

224 bp

Thymine Count

398 bp

Guanine Count

390 bp

Cytosine Count

334 bp

Genome Length

1346 bp

Protein-coding Genes

1 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Abc transporterPD_RS01900Q87EF0Positive450846 - 45259464187.6
tetraacyldisaccharide 4'-kinasePD_RS01905B2I804Positive452591 - 45361038320.3
AttlNot AvailableNot AvailablePositive453721 - 453732Not Available
Phage-related tail proteinPD_RS01910Not AvailableNegative454017 - 45471825600.5
Putative phage tail fiber proteinPD_RS01915Not AvailableNegative454741 - 45560730559.9
Phage-related tail proteinPD_RS01920Not AvailableNegative455615 - 45617220603.0
Phage-related baseplate assembly proteinPD_RS01925Not AvailableNegative456165 - 45705832150.3
Phage-related baseplate assembly proteinPD_RS01930P51768Negative457058 - 45739612255.0
Plasmid maintenance system killer higbPD_RS01935Not AvailablePositive457594 - 45787510639.8
Putative xre family plasmid maintenance system antidote proteinPD_RS01940P37371Positive457886 - 45816110073.3

Displaying genes 1 – 10 of 4546 in total

Metabolites

1617 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0019862CL(12:0(3-OH)/10:0/12:0(3-OH)/10:0)C53H102O19P2Chemical structure of CL(12:0(3-OH)/10:0/12:0(3-OH)/10:0)NULL
Average1105.328Da
Monoisotopic1104.64905506Da
BASm0019863CL(12:0(3-OH)/12:0(3-OH)/12:0/12:0)C57H110O19P2Chemical structure of CL(12:0(3-OH)/12:0(3-OH)/12:0/12:0)NULL
Average1161.436Da
Monoisotopic1160.711655318Da
BASm0019864CL(12:0(3-OH)/12:0/12:0/12:0)C57H110O18P2Chemical structure of CL(12:0(3-OH)/12:0/12:0/12:0)NULL
Average1145.437Da
Monoisotopic1144.716740698Da
BASm0019865CL(12:0(3-OH)/14:0(3-OH)/12:0(3-OH)/14:0(3-OH))C61H118O21P2Chemical structure of CL(12:0(3-OH)/14:0(3-OH)/12:0(3-OH)/14:0(3-OH))NULL
Average1249.542Da
Monoisotopic1248.764084816Da
BASm0019866CL(12:0(3-OH)/14:0/12:0(3-OH)/14:0)C61H118O19P2Chemical structure of CL(12:0(3-OH)/14:0/12:0(3-OH)/14:0)NULL
Average1217.544Da
Monoisotopic1216.774255576Da
BASm0019867CL(12:0(3-OH)/15:0/12:0(3-OH)/15:0)C63H122O19P2Chemical structure of CL(12:0(3-OH)/15:0/12:0(3-OH)/15:0)NULL
Average1245.598Da
Monoisotopic1244.805555704Da
BASm0019868CL(12:0(3-OH)/15:0cyclo/12:0(3-OH)/15:0cyclo)C63H118O19P2Chemical structure of CL(12:0(3-OH)/15:0cyclo/12:0(3-OH)/15:0cyclo)NULL
Average1241.566Da
Monoisotopic1240.774255576Da
BASm0019870CL(12:0(3-OH)/17:0cycw7c/12:0/12:0)C62H118O18P2Chemical structure of CL(12:0(3-OH)/17:0cycw7c/12:0/12:0)NULL
Average1213.556Da
Monoisotopic1212.779340956Da
BASm0019871CL(12:0(3-OH)/18:1(9Z)/12:0(3-OH)/18:1(9Z))C69H130O19P2Chemical structure of CL(12:0(3-OH)/18:1(9Z)/12:0(3-OH)/18:1(9Z))NULL
Average1325.728Da
Monoisotopic1324.868155962Da
BASm0019872CL(12:0(3-OH)/19:0cycv8c/12:0(3-OH)/19:0cycv8c)C71H134O19P2Chemical structure of CL(12:0(3-OH)/19:0cycv8c/12:0(3-OH)/19:0cycv8c)NULL
Average1353.782Da
Monoisotopic1352.899456091Da

Displaying 1441–1450 of 1617 metabolites

Health Effects

No health effects information available for this bacterium.