Xylella fastidiosa Temecula1

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Xanthomonadales

Family

Xanthomonadaceae

Genus

Xylella

Description

Xylella fastidiosa Temecula1 is a Gram-negative, rod-shaped bacterium characterized by its single-cell arrangement and absence of motility, despite possessing true flagella. This microbe features a unique structure with two cellular membranes, indicative of a typical Gram-negative cell envelope. It is classified as an aerobe, thriving optimally at a temperature of 26°C within a mesophilic range. Xylella fastidiosa Temecula1 is host-associated and exhibits a free-living biotic relationship, suggesting its adaptability to different environments while relying on host interactions for survival. Notably, this strain does not demonstrate pathogenicity, indicating it does not cause disease in its host or surrounding ecosystems. The genomic structure of Xylella fastidiosa Temecula1 consists of three replicons, with genome accessions NC_004556, NC_004554.1, and NC_004556.1 providing a basis for further genetic and functional studies. Understanding the traits of Xylella fastidiosa Temecula1 can offer insights into the ecological dynamics of microbial communities associated with host plants, potentially influencing plant health and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderXanthomonadales
FamilyXanthomonadaceae
GenusXylella
Speciesfastidiosa
StrainTemecula1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa Temecula1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Xylella fastidiosa Temecula1 plasmid pXFPD1.3, complete sequence.

Gene Summary

Adenine Count

224 bp

Thymine Count

398 bp

Guanine Count

390 bp

Cytosine Count

334 bp

Genome Length

1346 bp

Protein-coding Genes

1 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Abc transporterPD_RS01900Q87EF0Positive450846 - 45259464187.6
tetraacyldisaccharide 4'-kinasePD_RS01905B2I804Positive452591 - 45361038320.3
AttlNot AvailableNot AvailablePositive453721 - 453732Not Available
Phage-related tail proteinPD_RS01910Not AvailableNegative454017 - 45471825600.5
Putative phage tail fiber proteinPD_RS01915Not AvailableNegative454741 - 45560730559.9
Phage-related tail proteinPD_RS01920Not AvailableNegative455615 - 45617220603.0
Phage-related baseplate assembly proteinPD_RS01925Not AvailableNegative456165 - 45705832150.3
Phage-related baseplate assembly proteinPD_RS01930P51768Negative457058 - 45739612255.0
Plasmid maintenance system killer higbPD_RS01935Not AvailablePositive457594 - 45787510639.8
Putative xre family plasmid maintenance system antidote proteinPD_RS01940P37371Positive457886 - 45816110073.3

Displaying genes 1 – 10 of 4546 in total

Metabolites

1617 records
Metabolite IDMetabolite nameStructureCAS number
BASm0019732CDP-DG(19:0cycv8c/12:0(3-OH))C43H77N3O16P2Chemical structure of CDP-DG(19:0cycv8c/12:0(3-OH))NULL
Average954.042Da
Monoisotopic953.477907407Da
BASm0019733CDP-DG(19:0cycv8c/14:0)C45H81N3O15P2Chemical structure of CDP-DG(19:0cycv8c/14:0)NULL
Average966.097Da
Monoisotopic965.514292916Da
BASm0019734CDP-DG(19:0cycv8c/15:0cyclo)C46H81N3O15P2Chemical structure of CDP-DG(19:0cycv8c/15:0cyclo)NULL
Average978.108Da
Monoisotopic977.514292916Da
BASm0019735CDP-DG(19:0cycv8c/16:0)C47H85N3O15P2Chemical structure of CDP-DG(19:0cycv8c/16:0)NULL
Average994.151Da
Monoisotopic993.545593045Da
BASm0019736CDP-DG(19:0cycv8c/16:1(9Z))C47H83N3O15P2Chemical structure of CDP-DG(19:0cycv8c/16:1(9Z))NULL
Average992.135Da
Monoisotopic991.529942981Da
BASm0019737CDP-DG(19:0cycv8c/17:0cycw7c)C48H85N3O15P2Chemical structure of CDP-DG(19:0cycv8c/17:0cycw7c)NULL
Average1006.162Da
Monoisotopic1005.545593045Da
BASm0019738CDP-DG(19:0cycv8c/18:1(9Z))C49H87N3O15P2Chemical structure of CDP-DG(19:0cycv8c/18:1(9Z))NULL
Average1020.189Da
Monoisotopic1019.561243109Da
BASm0019739CDP-DG(19:0cycv8c/19:0cycv8c)C50H89N3O15P2Chemical structure of CDP-DG(19:0cycv8c/19:0cycv8c)NULL
Average1034.216Da
Monoisotopic1033.576893174Da
BASm0019740CDP-DG(19:0cycw8c/10:0)C41H73N3O15P2Chemical structure of CDP-DG(19:0cycw8c/10:0)NULL
Average909.989Da
Monoisotopic909.451692659Da
BASm0019741CDP-DG(19:iso/10:0(3-OH))C41H75N3O16P2Chemical structure of CDP-DG(19:iso/10:0(3-OH))NULL
Average928.004Da
Monoisotopic927.462257343Da

Displaying 1411–1420 of 1617 metabolites

Health Effects

No health effects information available for this bacterium.