Xylella fastidiosa Temecula1

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Xanthomonadales

Family

Xanthomonadaceae

Genus

Xylella

Description

Xylella fastidiosa Temecula1 is a Gram-negative, rod-shaped bacterium characterized by its single-cell arrangement and absence of motility, despite possessing true flagella. This microbe features a unique structure with two cellular membranes, indicative of a typical Gram-negative cell envelope. It is classified as an aerobe, thriving optimally at a temperature of 26°C within a mesophilic range. Xylella fastidiosa Temecula1 is host-associated and exhibits a free-living biotic relationship, suggesting its adaptability to different environments while relying on host interactions for survival. Notably, this strain does not demonstrate pathogenicity, indicating it does not cause disease in its host or surrounding ecosystems. The genomic structure of Xylella fastidiosa Temecula1 consists of three replicons, with genome accessions NC_004556, NC_004554.1, and NC_004556.1 providing a basis for further genetic and functional studies. Understanding the traits of Xylella fastidiosa Temecula1 can offer insights into the ecological dynamics of microbial communities associated with host plants, potentially influencing plant health and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderXanthomonadales
FamilyXanthomonadaceae
GenusXylella
Speciesfastidiosa
StrainTemecula1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa Temecula1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Xylella fastidiosa Temecula1 plasmid pXFPD1.3, complete sequence.

Gene Summary

Adenine Count

224 bp

Thymine Count

398 bp

Guanine Count

390 bp

Cytosine Count

334 bp

Genome Length

1346 bp

Protein-coding Genes

1 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Abc transporterPD_RS01900Q87EF0Positive450846 - 45259464187.6
tetraacyldisaccharide 4'-kinasePD_RS01905B2I804Positive452591 - 45361038320.3
AttlNot AvailableNot AvailablePositive453721 - 453732Not Available
Phage-related tail proteinPD_RS01910Not AvailableNegative454017 - 45471825600.5
Putative phage tail fiber proteinPD_RS01915Not AvailableNegative454741 - 45560730559.9
Phage-related tail proteinPD_RS01920Not AvailableNegative455615 - 45617220603.0
Phage-related baseplate assembly proteinPD_RS01925Not AvailableNegative456165 - 45705832150.3
Phage-related baseplate assembly proteinPD_RS01930P51768Negative457058 - 45739612255.0
Plasmid maintenance system killer higbPD_RS01935Not AvailablePositive457594 - 45787510639.8
Putative xre family plasmid maintenance system antidote proteinPD_RS01940P37371Positive457886 - 45816110073.3

Displaying genes 1 – 10 of 4546 in total

Metabolites

1617 records
Metabolite IDMetabolite nameStructureCAS number
BASm0019668CDP-DG(12:0/12:0)C36H65N3O15P2Chemical structure of CDP-DG(12:0/12:0)NULL
Average841.87Da
Monoisotopic841.389092401Da
BASm0019669CDP-DG(12:0/14:0(3-OH))C38H69N3O16P2Chemical structure of CDP-DG(12:0/14:0(3-OH))NULL
Average885.923Da
Monoisotopic885.41530715Da
BASm0019670CDP-DG(12:0/17:0cycw7c)C41H73N3O15P2Chemical structure of CDP-DG(12:0/17:0cycw7c)NULL
Average909.989Da
Monoisotopic909.451692659Da
BASm0019671CDP-DG(12:0/19:iso)C43H79N3O15P2Chemical structure of CDP-DG(12:0/19:iso)NULL
Average940.059Da
Monoisotopic939.498642852Da
BASm0019672CDP-DG(14:0(3-OH)/12:0(3-OH))C38H69N3O17P2Chemical structure of CDP-DG(14:0(3-OH)/12:0(3-OH))NULL
Average901.922Da
Monoisotopic901.41022177Da
BASm0019673CDP-DG(14:0(3-OH)/12:0)C38H69N3O16P2Chemical structure of CDP-DG(14:0(3-OH)/12:0)NULL
Average885.923Da
Monoisotopic885.41530715Da
BASm0019674CDP-DG(14:0(3-OH)/14:0(3-OH))C40H73N3O17P2Chemical structure of CDP-DG(14:0(3-OH)/14:0(3-OH))NULL
Average929.976Da
Monoisotopic929.441521899Da
BASm0019675CDP-DG(14:0(3-OH)/14:0)C40H73N3O16P2Chemical structure of CDP-DG(14:0(3-OH)/14:0)NULL
Average913.977Da
Monoisotopic913.446607279Da
BASm0019676CDP-DG(14:0(3-OH)/16:0)C42H77N3O16P2Chemical structure of CDP-DG(14:0(3-OH)/16:0)NULL
Average942.031Da
Monoisotopic941.477907407Da
BASm0019677CDP-DG(14:0(3-OH)/16:1(9Z))C42H75N3O16P2Chemical structure of CDP-DG(14:0(3-OH)/16:1(9Z))NULL
Average940.015Da
Monoisotopic939.462257343Da

Displaying 1351–1360 of 1617 metabolites

Health Effects

No health effects information available for this bacterium.