Xylella fastidiosa Temecula1

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Xanthomonadales

Family

Xanthomonadaceae

Genus

Xylella

Description

Xylella fastidiosa Temecula1 is a Gram-negative, rod-shaped bacterium characterized by its single-cell arrangement and absence of motility, despite possessing true flagella. This microbe features a unique structure with two cellular membranes, indicative of a typical Gram-negative cell envelope. It is classified as an aerobe, thriving optimally at a temperature of 26°C within a mesophilic range. Xylella fastidiosa Temecula1 is host-associated and exhibits a free-living biotic relationship, suggesting its adaptability to different environments while relying on host interactions for survival. Notably, this strain does not demonstrate pathogenicity, indicating it does not cause disease in its host or surrounding ecosystems. The genomic structure of Xylella fastidiosa Temecula1 consists of three replicons, with genome accessions NC_004556, NC_004554.1, and NC_004556.1 providing a basis for further genetic and functional studies. Understanding the traits of Xylella fastidiosa Temecula1 can offer insights into the ecological dynamics of microbial communities associated with host plants, potentially influencing plant health and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderXanthomonadales
FamilyXanthomonadaceae
GenusXylella
Speciesfastidiosa
StrainTemecula1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa Temecula1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Xylella fastidiosa Temecula1 plasmid pXFPD1.3, complete sequence.

Gene Summary

Adenine Count

224 bp

Thymine Count

398 bp

Guanine Count

390 bp

Cytosine Count

334 bp

Genome Length

1346 bp

Protein-coding Genes

1 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Abc transporterPD_RS01900Q87EF0Positive450846 - 45259464187.6
tetraacyldisaccharide 4'-kinasePD_RS01905B2I804Positive452591 - 45361038320.3
AttlNot AvailableNot AvailablePositive453721 - 453732Not Available
Phage-related tail proteinPD_RS01910Not AvailableNegative454017 - 45471825600.5
Putative phage tail fiber proteinPD_RS01915Not AvailableNegative454741 - 45560730559.9
Phage-related tail proteinPD_RS01920Not AvailableNegative455615 - 45617220603.0
Phage-related baseplate assembly proteinPD_RS01925Not AvailableNegative456165 - 45705832150.3
Phage-related baseplate assembly proteinPD_RS01930P51768Negative457058 - 45739612255.0
Plasmid maintenance system killer higbPD_RS01935Not AvailablePositive457594 - 45787510639.8
Putative xre family plasmid maintenance system antidote proteinPD_RS01940P37371Positive457886 - 45816110073.3

Displaying genes 1 – 10 of 4546 in total

Metabolites

1617 records
Metabolite IDMetabolite nameStructureCAS number
BASm0018928Fe(III)dicitrateC12H28FeO14Chemical structure of Fe(III)dicitrateNULL
Average452.187Da
Monoisotopic452.082847737Da
BASm0018929Ferrichrome minus Fe(III)C27H42N9O12Chemical structure of Ferrichrome minus Fe(III)NULL
Average684.6755Da
Monoisotopic684.295292853Da
BASm0018974Tetradecenoate (N-C14:1)C14H25O2Chemical structure of Tetradecenoate (N-C14:1)NULL
Average225.3471Da
Monoisotopic225.185455044Da
BASm0018976Ferric enterobactinC30H33FeN3O15Chemical structure of Ferric enterobactinNULL
Average731.439Da
Monoisotopic731.126109534Da
BASm00189834-Amino-4-deoxy-L-arabinoseC14H23N3O15P2Chemical structure of 4-Amino-4-deoxy-L-arabinoseNULL
Average535.291Da
Monoisotopic535.060440105Da
BASm0019003lipid II(A)C95H152N8O28P2Chemical structure of lipid II(A)NULL
Average1916.2077Da
Monoisotopic1915.019129344Da
BASm0019034epoxyqueuosineC17H23N5O8Chemical structure of epoxyqueuosineNULL
Average425.3932Da
Monoisotopic425.154662737Da
BASm00190367-Aminomethyl-7-deazaguanosineC12H17N5O5Chemical structure of 7-Aminomethyl-7-deazaguanosineNULL
Average311.2939Da
Monoisotopic311.122968679Da
BASm0019129PolyphosphateH5O10P3Chemical structure of PolyphosphateNULL
Average257.955Da
Monoisotopic257.909555916Da
BASm00191605,10-Methenyltetrahydrofolic acidC20H21N7O6Chemical structure of 5,10-Methenyltetrahydrofolic acidNULL
Average455.424Da
Monoisotopic455.155331439Da

Displaying 1111–1120 of 1617 metabolites

Health Effects

No health effects information available for this bacterium.