Xylella fastidiosa Temecula1

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Xanthomonadales

Family

Xanthomonadaceae

Genus

Xylella

Description

Xylella fastidiosa Temecula1 is a Gram-negative, rod-shaped bacterium characterized by its single-cell arrangement and absence of motility, despite possessing true flagella. This microbe features a unique structure with two cellular membranes, indicative of a typical Gram-negative cell envelope. It is classified as an aerobe, thriving optimally at a temperature of 26°C within a mesophilic range. Xylella fastidiosa Temecula1 is host-associated and exhibits a free-living biotic relationship, suggesting its adaptability to different environments while relying on host interactions for survival. Notably, this strain does not demonstrate pathogenicity, indicating it does not cause disease in its host or surrounding ecosystems. The genomic structure of Xylella fastidiosa Temecula1 consists of three replicons, with genome accessions NC_004556, NC_004554.1, and NC_004556.1 providing a basis for further genetic and functional studies. Understanding the traits of Xylella fastidiosa Temecula1 can offer insights into the ecological dynamics of microbial communities associated with host plants, potentially influencing plant health and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderXanthomonadales
FamilyXanthomonadaceae
GenusXylella
Speciesfastidiosa
StrainTemecula1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa Temecula1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Xylella fastidiosa Temecula1 plasmid pXFPD1.3, complete sequence.

Gene Summary

Adenine Count

224 bp

Thymine Count

398 bp

Guanine Count

390 bp

Cytosine Count

334 bp

Genome Length

1346 bp

Protein-coding Genes

1 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Abc transporterPD_RS01900Q87EF0Positive450846 - 45259464187.6
tetraacyldisaccharide 4'-kinasePD_RS01905B2I804Positive452591 - 45361038320.3
AttlNot AvailableNot AvailablePositive453721 - 453732Not Available
Phage-related tail proteinPD_RS01910Not AvailableNegative454017 - 45471825600.5
Putative phage tail fiber proteinPD_RS01915Not AvailableNegative454741 - 45560730559.9
Phage-related tail proteinPD_RS01920Not AvailableNegative455615 - 45617220603.0
Phage-related baseplate assembly proteinPD_RS01925Not AvailableNegative456165 - 45705832150.3
Phage-related baseplate assembly proteinPD_RS01930P51768Negative457058 - 45739612255.0
Plasmid maintenance system killer higbPD_RS01935Not AvailablePositive457594 - 45787510639.8
Putative xre family plasmid maintenance system antidote proteinPD_RS01940P37371Positive457886 - 45816110073.3

Displaying genes 1 – 10 of 4546 in total

Metabolites

1617 records
Metabolite IDMetabolite nameStructureCAS number
BASm0018667PE(19:iso/12:0(3-OH))C36H72NO9PChemical structure of PE(19:iso/12:0(3-OH))NULL
Average693.944Da
Monoisotopic693.4944699Da
BASm0018668PE(19:iso/14:0)C38H76NO8PChemical structure of PE(19:iso/14:0)NULL
Average705.999Da
Monoisotopic705.530855409Da
BASm0018669PE(19:iso/14:0(3-OH))C38H76NO9PChemical structure of PE(19:iso/14:0(3-OH))NULL
Average721.998Da
Monoisotopic721.525770029Da
BASm0018674PE(19:iso/17:0cycw7c)C41H80NO8PChemical structure of PE(19:iso/17:0cycw7c)NULL
Average746.064Da
Monoisotopic745.562155538Da
BASm0018676PE(19:iso/19:0cycv8c)C43H84NO8PChemical structure of PE(19:iso/19:0cycv8c)NULL
Average774.118Da
Monoisotopic773.593455667Da
BASm0018677PE(19:iso/19:iso)C43H86NO8PChemical structure of PE(19:iso/19:iso)NULL
Average776.134Da
Monoisotopic775.609105731Da
BASm0018678PS(10:0(3-OH)/10:0)C26H50NO11PChemical structure of PS(10:0(3-OH)/10:0)NULL
Average583.656Da
Monoisotopic583.312148432Da
BASm0018680PS(10:0(3-OH)/12:0)C28H54NO11PChemical structure of PS(10:0(3-OH)/12:0)NULL
Average611.71Da
Monoisotopic611.343448561Da
BASm0018681PS(10:0(3-OH)/12:0(3-OH))C28H54NO12PChemical structure of PS(10:0(3-OH)/12:0(3-OH))NULL
Average627.709Da
Monoisotopic627.338363181Da
BASm0018685PS(10:0(3-OH)/15:0cyclo)C31H58NO11PChemical structure of PS(10:0(3-OH)/15:0cyclo)NULL
Average651.775Da
Monoisotopic651.37474869Da

Displaying 991–1000 of 1617 metabolites

Health Effects

No health effects information available for this bacterium.