Salmonella enterica subsp. enterica serovar Typhimurium

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Typhimurium is a Gram-negative, rod-shaped bacterium that thrives at mesophilic temperatures, classifying it as a facultative anaerobe and a chemoheterotroph. This microbe is capable of surviving in various body sites across multiple species, including the gastrointestinal tracts of mammals, birds, reptiles, and even humans, highlighting its ecological versatility. As a Gram-negative organism, S. Typhimurium possesses a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, which can contribute to its virulence and ability to evade the host immune response. Its rod shape allows for motility, facilitated by flagella, enabling efficient movement through viscous environments such as the intestinal lumen, where it often resides. Being mesophilic, it optimally grows at temperatures around 37°C, aligning with the internal body temperature of its warm-blooded hosts. As a facultative anaerobe, S. Typhimurium can generate energy both in the presence and absence of oxygen, demonstrating metabolic flexibility that enhances its survival in diverse environments. Its classification as a chemoheterotroph indicates that it derives energy and carbon from organic compounds, often utilizing nutrients found in the gut. This bacterium is notorious for its role in foodborne illnesses, commonly associated with the consumption of undercooked poultry, eggs, and other contaminated foods. Symptoms of infection can include diarrhea, fever, and abdominal cramps, often resulting from the organism's ability to invade intestinal epithelial cells and elicit strong immune responses. Additionally, S. Typhimurium has been extensively studied in laboratories, serving as a model organism for understanding bacterial pathogenesis and host interactions, as well as the development of antimicrobial strategies.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
Speciesenterica
StrainTyphimurium

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salmonella enterica subsp. enterica serovar Typhimurium
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Typhimurium

Accession NumberNZ_AP014565.1

Gene Summary

Adenine Count

1207916 bp

Thymine Count

1209136 bp

Guanine Count

1315398 bp

Cytosine Count

1319391 bp

Genome Length

5051841 bp

Protein-coding Genes

4445620 genes

Non-Coding Genes

606221 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+368699 - 368745Not Available
IntegraseSTL3553_RS27830P04890-368759 - 36992244832.0
ExcisionaseSTL3553_RS25695P04889-369835 - 37014911533.8
Formate dehydrogenase n alpha subunitSTL3553_RS27835Not Available-370152 - 3702924887.25
Hypothetical proteinSTL3553_RS28060Q03544-370630 - 3707554702.75
Putative methylaseSTL3553_RS01670Not Available-370759 - 37123218069.9
Gene 21 proteinSTL3553_RS01675Not Available-371361 - 37168111797.8
Hypothetical proteinSTL3553_RS01680Not Available-371683 - 37198211456.9
Hypothetical proteinSTL3553_RS01685P76515-371979 - 37237714279.1
Hypothetical proteinSTL3553_RS01690P11192-372374 - 3725386374.91

Displaying genes 1 – 10 of 19841 in total

Pathways

2 pathways

Metabolites

337 records
Metabolite IDMetabolite nameStructureCAS number
BASm0010136Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]2C20H15FeN2O11Chemical structure of Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]2Not available
Average515.189Da
Monoisotopic515.003617Da
BASm0010139N-(2,3-dihydroxybenzoyl)-L-serine trimerC30H28N3O16Chemical structure of N-(2,3-dihydroxybenzoyl)-L-serine trimerNot available
Average686.56Da
Monoisotopic686.147505414Da
BASm0010140[N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]3C48H58N3O31Chemical structure of [N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]3Not available
Average1172.983Da
Monoisotopic1172.30597568Da
BASm0010141N-(2,3-dihydroxybenzoyl)-L-seryl-[N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]2C42H48N3O26Chemical structure of N-(2,3-dihydroxybenzoyl)-L-seryl-[N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]2Not available
Average1010.842Da
Monoisotopic1010.253152Da
BASm0010142[N-(2,3-dihydroxybenzoyl)-L-seryl]2-N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serineC36H38N3O21Chemical structure of [N-(2,3-dihydroxybenzoyl)-L-seryl]2-N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serineNot available
Average848.701Da
Monoisotopic848.2003288Da
BASm00102688-oxo-GDPC10H12N5O12P2Chemical structure of 8-oxo-GDPNot available
Average456.178Da
Monoisotopic455.997415582Da
BASm0010306Fe(III)-di(C-5-deoxy-beta-D-glucosyl)-enterobactinC42H41FeN3O25Chemical structure of Fe(III)-di(C-5-deoxy-beta-D-glucosyl)-enterobactinNot available
Average1043.633Da
Monoisotopic1043.139496Da
BASm0010307Fe(III)-C-5-deoxy-beta-D-glucosyl-enterobactinC36H31FeN3O20Chemical structure of Fe(III)-C-5-deoxy-beta-D-glucosyl-enterobactinNot available
Average881.492Da
Monoisotopic881.086672Da
BASm0010308Fe(III)-{N-(2,3-dihydroxybenzoyl)-L-seryl-[N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]2}C42H42FeN3O26Chemical structure of Fe(III)-{N-(2,3-dihydroxybenzoyl)-L-seryl-[N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]2}Not available
Average1060.64Da
Monoisotopic1060.142784Da
BASm0010309Fe(III)-{di[N-(2,3-dihydroxybenzoyl)-L-seryl]-N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine}C36H32FeN3O21Chemical structure of Fe(III)-{di[N-(2,3-dihydroxybenzoyl)-L-seryl]-N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine}Not available
Average898.499Da
Monoisotopic898.08996Da

Displaying 301–310 of 337 metabolites