Salmonella enterica subsp. enterica serovar Typhimurium

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Typhimurium is a Gram-negative, rod-shaped bacterium that thrives at mesophilic temperatures, classifying it as a facultative anaerobe and a chemoheterotroph. This microbe is capable of surviving in various body sites across multiple species, including the gastrointestinal tracts of mammals, birds, reptiles, and even humans, highlighting its ecological versatility. As a Gram-negative organism, S. Typhimurium possesses a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, which can contribute to its virulence and ability to evade the host immune response. Its rod shape allows for motility, facilitated by flagella, enabling efficient movement through viscous environments such as the intestinal lumen, where it often resides. Being mesophilic, it optimally grows at temperatures around 37°C, aligning with the internal body temperature of its warm-blooded hosts. As a facultative anaerobe, S. Typhimurium can generate energy both in the presence and absence of oxygen, demonstrating metabolic flexibility that enhances its survival in diverse environments. Its classification as a chemoheterotroph indicates that it derives energy and carbon from organic compounds, often utilizing nutrients found in the gut. This bacterium is notorious for its role in foodborne illnesses, commonly associated with the consumption of undercooked poultry, eggs, and other contaminated foods. Symptoms of infection can include diarrhea, fever, and abdominal cramps, often resulting from the organism's ability to invade intestinal epithelial cells and elicit strong immune responses. Additionally, S. Typhimurium has been extensively studied in laboratories, serving as a model organism for understanding bacterial pathogenesis and host interactions, as well as the development of antimicrobial strategies.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
Speciesenterica
StrainTyphimurium

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salmonella enterica subsp. enterica serovar Typhimurium
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Typhimurium

Accession NumberNZ_AP014565.1

Gene Summary

Adenine Count

1207916 bp

Thymine Count

1209136 bp

Guanine Count

1315398 bp

Cytosine Count

1319391 bp

Genome Length

5051841 bp

Protein-coding Genes

4445620 genes

Non-Coding Genes

606221 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+368699 - 368745Not Available
IntegraseSTL3553_RS27830P04890-368759 - 36992244832.0
ExcisionaseSTL3553_RS25695P04889-369835 - 37014911533.8
Formate dehydrogenase n alpha subunitSTL3553_RS27835Not Available-370152 - 3702924887.25
Hypothetical proteinSTL3553_RS28060Q03544-370630 - 3707554702.75
Putative methylaseSTL3553_RS01670Not Available-370759 - 37123218069.9
Gene 21 proteinSTL3553_RS01675Not Available-371361 - 37168111797.8
Hypothetical proteinSTL3553_RS01680Not Available-371683 - 37198211456.9
Hypothetical proteinSTL3553_RS01685P76515-371979 - 37237714279.1
Hypothetical proteinSTL3553_RS01690P11192-372374 - 3725386374.91

Displaying genes 1 – 10 of 19841 in total

Pathways

2 pathways

Metabolites

337 records
Metabolite IDMetabolite nameStructureCAS number
BASm0010310Fe(III)-{N-(2,3-dihydroxybenzoyl)-L-seryl-N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine}C26H25FeN2O16Chemical structure of Fe(III)-{N-(2,3-dihydroxybenzoyl)-L-seryl-N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine}Not available
Average677.33Da
Monoisotopic677.056441Da
BASm0010311Fe(III)-[N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]2C32H35FeN2O21Chemical structure of Fe(III)-[N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]2Not available
Average839.471Da
Monoisotopic839.109264Da
BASm0010312Fe(III)-[N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]C16H18FeNO11Chemical structure of Fe(III)-[N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]Not available
Average456.161Da
Monoisotopic456.022921Da
BASm0010313N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serineC16H20NO11Chemical structure of N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serineNot available
Average402.333Da
Monoisotopic402.104184Da
BASm0010316N(1)-(5-phospho-beta-D-ribosyl)glycinamideC7H14N2O8PChemical structure of N(1)-(5-phospho-beta-D-ribosyl)glycinamideNot available
Average285.169Da
Monoisotopic285.049326Da
BASm00105312''-O-(2-hydroxyisobutanoyl)-ADP-D-riboseC19H27N5O16P2Chemical structure of 2''-O-(2-hydroxyisobutanoyl)-ADP-D-riboseNot available
Average643.393Da
Monoisotopic643.093900965Da
BASm00106538-oxo-GMPC10H12N5O9PChemical structure of 8-oxo-GMPNot available
Average377.207Da
Monoisotopic377.038361144Da
BASm00107383-phosphoshikimateC7H8O8PChemical structure of 3-phosphoshikimateNot available
Average251.108Da
Monoisotopic250.997324955Da
BASm0010758N(4)-acetyl-2'-deoxycytidineC11H15N3O5Chemical structure of N(4)-acetyl-2'-deoxycytidineNot available
Average269.257Da
Monoisotopic269.101170595Da
BASm0010759N(4)-acetylcytosineC6H7N3O2Chemical structure of N(4)-acetylcytosineNot available
Average153.141Da
Monoisotopic153.053826477Da

Displaying 311–320 of 337 metabolites