Salmonella enterica subsp. enterica serovar Typhimurium

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Typhimurium is a Gram-negative, rod-shaped bacterium that thrives at mesophilic temperatures, classifying it as a facultative anaerobe and a chemoheterotroph. This microbe is capable of surviving in various body sites across multiple species, including the gastrointestinal tracts of mammals, birds, reptiles, and even humans, highlighting its ecological versatility. As a Gram-negative organism, S. Typhimurium possesses a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, which can contribute to its virulence and ability to evade the host immune response. Its rod shape allows for motility, facilitated by flagella, enabling efficient movement through viscous environments such as the intestinal lumen, where it often resides. Being mesophilic, it optimally grows at temperatures around 37°C, aligning with the internal body temperature of its warm-blooded hosts. As a facultative anaerobe, S. Typhimurium can generate energy both in the presence and absence of oxygen, demonstrating metabolic flexibility that enhances its survival in diverse environments. Its classification as a chemoheterotroph indicates that it derives energy and carbon from organic compounds, often utilizing nutrients found in the gut. This bacterium is notorious for its role in foodborne illnesses, commonly associated with the consumption of undercooked poultry, eggs, and other contaminated foods. Symptoms of infection can include diarrhea, fever, and abdominal cramps, often resulting from the organism's ability to invade intestinal epithelial cells and elicit strong immune responses. Additionally, S. Typhimurium has been extensively studied in laboratories, serving as a model organism for understanding bacterial pathogenesis and host interactions, as well as the development of antimicrobial strategies.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
Speciesenterica
StrainTyphimurium

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salmonella enterica subsp. enterica serovar Typhimurium
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Typhimurium

Accession NumberNZ_AP014565.1

Gene Summary

Adenine Count

1207916 bp

Thymine Count

1209136 bp

Guanine Count

1315398 bp

Cytosine Count

1319391 bp

Genome Length

5051841 bp

Protein-coding Genes

4445620 genes

Non-Coding Genes

606221 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinSTL3553_RS01920Not Available+402998 - 40363624348.3
Putative antirepressor family proteinSTL3553_RS01925Not Available+403720 - 40449329309.2
TailspikeSTL3553_RS01930P12528+404605 - 40657271362.1
O-polysaccharide acetyltransferase proteinSTL3553_RS01935Not Available-406608 - 40853071271.2
Bactoprenol-linked glucose translocase (flippase)STL3553_RS27850Not Available-408602 - 40887710103.5
AttrNot AvailableNot Available+409489 - 409535Not Available
Is3 transposase bSTL3553_RS01940Not Available-409797 - 41057630019.6
Nicotinate phosphoribosyltransferaseSTL3553_RS05895P22253-1219482 - 122068445663.7
AttlNot AvailableNot Available+1220830 - 1220844Not Available
Bacteriophage integraseSTL3553_RS05900P76168-1220879 - 122217149033.2

Displaying genes 61 – 70 of 19841 in total

Pathways

2 pathways

Metabolites

337 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002783(2R)-2-O-(alpha-D-mannosyl)-glycerateC9H15O9Chemical structure of (2R)-2-O-(alpha-D-mannosyl)-glycerateNot available
Average267.211Da
Monoisotopic267.0721556Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm00028782-oxo-3-sulfanylpropanoateC3H3O3SChemical structure of 2-oxo-3-sulfanylpropanoateNot available
Average119.11Da
Monoisotopic118.9808387Da
BASm0002906all-trans-octaprenyl diphosphateC40H65O7P2Chemical structure of all-trans-octaprenyl diphosphateNot available
Average719.8874Da
Monoisotopic719.4205525Da
BASm00029302-O-(alpha-D-mannosyl)-3-phosphoglycerateC9H14O12PChemical structure of 2-O-(alpha-D-mannosyl)-3-phosphoglycerateNot available
Average345.174Da
Monoisotopic345.0239336Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da
BASm0002984N-carbamoyl-2-oxoglycineC3H3N2O4Chemical structure of N-carbamoyl-2-oxoglycineNot available
Average131.068Da
Monoisotopic131.0098302Da
BASm0002994glutathionylspermidineC17H36N6O5SNot available33932-35-3
Average436.57Da
Monoisotopic436.245692297Da

Displaying 91–100 of 337 metabolites