Salmonella enterica subsp. enterica serovar Typhimurium

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Typhimurium is a Gram-negative, rod-shaped bacterium that thrives at mesophilic temperatures, classifying it as a facultative anaerobe and a chemoheterotroph. This microbe is capable of surviving in various body sites across multiple species, including the gastrointestinal tracts of mammals, birds, reptiles, and even humans, highlighting its ecological versatility. As a Gram-negative organism, S. Typhimurium possesses a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, which can contribute to its virulence and ability to evade the host immune response. Its rod shape allows for motility, facilitated by flagella, enabling efficient movement through viscous environments such as the intestinal lumen, where it often resides. Being mesophilic, it optimally grows at temperatures around 37°C, aligning with the internal body temperature of its warm-blooded hosts. As a facultative anaerobe, S. Typhimurium can generate energy both in the presence and absence of oxygen, demonstrating metabolic flexibility that enhances its survival in diverse environments. Its classification as a chemoheterotroph indicates that it derives energy and carbon from organic compounds, often utilizing nutrients found in the gut. This bacterium is notorious for its role in foodborne illnesses, commonly associated with the consumption of undercooked poultry, eggs, and other contaminated foods. Symptoms of infection can include diarrhea, fever, and abdominal cramps, often resulting from the organism's ability to invade intestinal epithelial cells and elicit strong immune responses. Additionally, S. Typhimurium has been extensively studied in laboratories, serving as a model organism for understanding bacterial pathogenesis and host interactions, as well as the development of antimicrobial strategies.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
Speciesenterica
StrainTyphimurium

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salmonella enterica subsp. enterica serovar Typhimurium
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Typhimurium

Accession NumberNZ_AP014565.1

Gene Summary

Adenine Count

1207916 bp

Thymine Count

1209136 bp

Guanine Count

1315398 bp

Cytosine Count

1319391 bp

Genome Length

5051841 bp

Protein-coding Genes

4445620 genes

Non-Coding Genes

606221 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Similar to c2 of bacteriophage lSTL3553_RS01740Not Available+377532 - 3777477771.41
Regulatory protein ciiSTL3553_RS01745Not Available+377857 - 37815311062.3
Putative helicaseSTL3553_RS01750Not Available+378186 - 37883023965.4
Dna replication protein oSTL3553_RS01755P03688+378817 - 37965931906.0
Putative replication protein dnacSTL3553_RS01760Not Available+379662 - 38050731965.3
Putative ren proteinSTL3553_RS01765Not Available+380504 - 38079411021.6
NinbSTL3553_RS01770Q38662+380868 - 38130516400.7
NindSTL3553_RS25715Q38663+381302 - 3814756957.99
NineSTL3553_RS25720Q38664+381442 - 3816187183.78
NinxSTL3553_RS01780Q38665+381621 - 38195312263.7

Displaying genes 21 – 30 of 19841 in total

Pathways

2 pathways

Metabolites

337 records
Metabolite IDMetabolite nameStructureCAS number
BASm0009321beta-D-fructose 1-phosphateC6H11O9PChemical structure of beta-D-fructose 1-phosphateNot available
Average258.12Da
Monoisotopic258.015166092Da
BASm0009677cob(II)inamideC48H72CoN11O8Chemical structure of cob(II)inamideNot available
Average990.106Da
Monoisotopic989.489179Da
BASm0009729(E)-2-((N-methylformamido) methylene)succinateC7H7NO5Chemical structure of (E)-2-((N-methylformamido) methylene)succinateNot available
Average185.136Da
Monoisotopic185.033519489Da
BASm0009746N(2)-(1-hydroxy-2-oxopropyl)-dGTPC13H16N5O15P3Chemical structure of N(2)-(1-hydroxy-2-oxopropyl)-dGTPNot available
Average575.214Da
Monoisotopic574.987770149Da
BASm0009747N(2)-(1-hydroxy-2-oxopropyl)-GTPC13H16N5O16P3Chemical structure of N(2)-(1-hydroxy-2-oxopropyl)-GTPNot available
Average591.213Da
Monoisotopic590.982684769Da
BASm0009748N(2)-(1-hydroxy-2-oxoethyl)-GTPC12H14N5O16P3Chemical structure of N(2)-(1-hydroxy-2-oxoethyl)-GTPNot available
Average577.186Da
Monoisotopic576.967034704Da
BASm0009749N(2)-(1-hydroxy-2-oxoethyl)-dGTPC12H14N5O15P3Chemical structure of N(2)-(1-hydroxy-2-oxoethyl)-dGTPNot available
Average561.187Da
Monoisotopic560.972120084Da
BASm0009750N(2)-(1-hydroxy-2-oxopropyl)-GDPC13H16N5O13P2Chemical structure of N(2)-(1-hydroxy-2-oxopropyl)-GDPNot available
Average512.242Da
Monoisotopic512.023630331Da
BASm0009751N(2)-(1-hydroxy-2-oxoethyl)-GDPC12H14N5O13P2Chemical structure of N(2)-(1-hydroxy-2-oxoethyl)-GDPNot available
Average498.215Da
Monoisotopic498.007980267Da
BASm0009752N(2)-(1-hydroxy-2-oxopropyl)-GMPC13H16N5O10PChemical structure of N(2)-(1-hydroxy-2-oxopropyl)-GMPNot available
Average433.271Da
Monoisotopic433.064575893Da

Displaying 281–290 of 337 metabolites