Escherichia coli str. K-12 substr. MG1655

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Enterobacteriales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. K-12 substr. MG1655 is a gram-negative, rod-shaped bacterium that thrives at mesophilic temperatures, is categorized as a chemoheterotroph, and is classified as a facultative anaerobe. This versatile organism is found in diverse environments, including the intestines of warm-blooded organisms, soil, and water, illustrating its adaptability to various ecosystems. The gram-negative nature of E. coli K-12 MG1655 is characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, which contributes to its pathogenic potential in some strains. The rod shape of this bacterium allows for efficient motility, facilitated by flagella, enabling it to navigate through various environments. Being a mesophilic organism, it prefers a temperature range of approximately 20-45°C, making it well-suited for survival in the gut of mammals where temperatures are typically around 37°C. As a chemoheterotroph, E. coli K-12 MG1655 derives its energy from the consumption of organic compounds, making it reliant on external sources of carbon for growth and metabolism. This bacterium's facultative anaerobic nature allows it to adapt to both aerobic and anaerobic conditions, enabling it to thrive in the oxygen-rich environment of the intestine and switch to fermentation in low-oxygen scenarios. Beyond its ecological importance, E. coli K-12 MG1655 serves as a cornerstone in molecular biology and biotechnology. It is often employed as a model organism for laboratory studies due to its rapid growth rate, ease of genetic manipulation, and safety compared to pathogenic strains. This strain has significantly contributed to advancements in genetic engineering, synthetic biology, and pharmaceuticals, exemplifying its role as a vital tool in scientific research and industrial applications.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderEnterobacteriales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainMG1655

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. K-12 substr. MG1655
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. K-12 substr. MG1655

Accession NumberNC_000913.3

Gene Summary

Adenine Count

1142742 bp

Thymine Count

1141382 bp

Guanine Count

1177437 bp

Cytosine Count

1180091 bp

Genome Length

4641652 bp

Protein-coding Genes

4224 genes

Non-Coding Genes

210 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
energy-dependent translational throttle protein ettab4391P0A9W4-4628855 - 463052262446.5
soluble lytic murein transglycosylaseb4392P0AGC4+4630733 - 463267073357.1
dna-binding transcriptional repressor trprb4393A7ZVT5+4632760 - 463308612355.9
inosine/xanthosine triphosphataseb4394B7LEP0-4633233 - 463374518213.7
putative phosphataseb4395A7ZVT7+4633797 - 463444424066.7
dna-binding transcriptional dual regulator robb4396P0ACI1-4634441 - 463531033146.8
pf05981 family protein creab4397P0AE93+4635521 - 463599417108.8
dna-binding transcriptional regulator crebb4398P08368+4636007 - 463669626126.8
sensory histidine kinase crecb4399P08401+4636696 - 463812052179.3
putative inner membrane protein credb4400P08369+4638178 - 463953049832.7

Displaying genes 4421 – 4430 of 4434 in total

Pathways

1847 pathways

Metabolites

935 records
Metabolite IDMetabolite nameStructureCAS number
BASm00021923-(2,3-dihydroxyphenyl)propanoateC9H9O4Chemical structure of 3-(2,3-dihydroxyphenyl)propanoateNot available
Average181.1654Da
Monoisotopic181.0500838Da
BASm0002198beta-D-ribofuranoseC5H10O5Chemical structure of beta-D-ribofuranose50-69-1
Average150.1299Da
Monoisotopic150.05282343Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002319Cu(+)CuChemical structure of Cu(+)7440-50-8
Average63.546Da
Monoisotopic62.92960108Da
BASm0002487L-galactonateC6H11O7Chemical structure of L-galactonateNot available
Average195.1473Da
Monoisotopic195.0504777Da
BASm00025382-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateC6H3O4Chemical structure of 2-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateNot available
Average139.087Da
Monoisotopic139.0036822Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da

Displaying 71–80 of 935 metabolites