Escherichia coli str. K-12 substr. MG1655

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Enterobacteriales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. K-12 substr. MG1655 is a gram-negative, rod-shaped bacterium that thrives at mesophilic temperatures, is categorized as a chemoheterotroph, and is classified as a facultative anaerobe. This versatile organism is found in diverse environments, including the intestines of warm-blooded organisms, soil, and water, illustrating its adaptability to various ecosystems. The gram-negative nature of E. coli K-12 MG1655 is characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, which contributes to its pathogenic potential in some strains. The rod shape of this bacterium allows for efficient motility, facilitated by flagella, enabling it to navigate through various environments. Being a mesophilic organism, it prefers a temperature range of approximately 20-45°C, making it well-suited for survival in the gut of mammals where temperatures are typically around 37°C. As a chemoheterotroph, E. coli K-12 MG1655 derives its energy from the consumption of organic compounds, making it reliant on external sources of carbon for growth and metabolism. This bacterium's facultative anaerobic nature allows it to adapt to both aerobic and anaerobic conditions, enabling it to thrive in the oxygen-rich environment of the intestine and switch to fermentation in low-oxygen scenarios. Beyond its ecological importance, E. coli K-12 MG1655 serves as a cornerstone in molecular biology and biotechnology. It is often employed as a model organism for laboratory studies due to its rapid growth rate, ease of genetic manipulation, and safety compared to pathogenic strains. This strain has significantly contributed to advancements in genetic engineering, synthetic biology, and pharmaceuticals, exemplifying its role as a vital tool in scientific research and industrial applications.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderEnterobacteriales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainMG1655

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. K-12 substr. MG1655
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. K-12 substr. MG1655

Accession NumberNC_000913.3

Gene Summary

Adenine Count

1142742 bp

Thymine Count

1141382 bp

Guanine Count

1177437 bp

Cytosine Count

1180091 bp

Genome Length

4641652 bp

Protein-coding Genes

4224 genes

Non-Coding Genes

210 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1198640 - 1198653Not Available
Integraseb1140P75969-1199679 - 120080642801.4
putative excisionaseb1141P75970-1200787 - 12010329287.34
putative protein ymfhb1142P75971-1201069 - 120138010963.4
uncharacterized protein ymfib1143P75972+1201497 - 120183812883.4
Hypothetical proteinb1144P75973-1201776 - 120208411459.2
Repressor / cib1145P75974-1202259 - 120293325096.1
Repressorb1146P75975+1203024 - 12032247402.87
Transcriptional regulatorb1147P75976+1203268 - 120382520212.8
Hypothetical proteinb1148P75977+1203822 - 120416012156.4

Displaying genes 31 – 40 of 4434 in total

Pathways

1847 pathways

Metabolites

935 records
Metabolite IDMetabolite nameStructureCAS number
BASm0033995PS(12:0/18:1(11Z))C36H68NO10PChemical structure of PS(12:0/18:1(11Z))NULL
Average705.911Da
Monoisotopic705.458084392Da
BASm0034007PS(14:0/15:0)C35H68NO10PChemical structure of PS(14:0/15:0)NULL
Average693.9Da
Monoisotopic693.458084392Da
BASm00345312-(a-Hydroxyethyl)thiamine diphosphateC14H23N4O8P2SChemical structure of 2-(a-Hydroxyethyl)thiamine diphosphateNULL
Average469.367Da
Monoisotopic469.071182446Da
BASm00345762Fe-2SFe2H8S6Chemical structure of 2Fe-2SNULL
Average312.11Da
Monoisotopic311.764899Da
BASm00345815'-S-methyl-5'-thioadenosineC11H15N5O3SNot availableNULL
Average297.33Da
Monoisotopic297.089560537Da
BASm00345833Fe-4S iron-sulfur clusterFe3H4S4Chemical structure of 3Fe-4S iron-sulfur clusterNULL
Average299.81Da
Monoisotopic299.72549Da
BASm00346023-Oxoadipic acidC6H8O5Chemical structure of 3-Oxoadipic acid689-31-6
Average160.1247Da
Monoisotopic160.037173366Da
BASm0034603PhosphoribosylformylglycinamidineC8H16N3O8PChemical structure of Phosphoribosylformylglycinamidine37721-04-3
Average313.203Da
Monoisotopic313.067501485Da
BASm0034607dTDP-4-oxo-6-deoxy-D-glucoseC16H24N2O15P2Chemical structure of dTDP-4-oxo-6-deoxy-D-glucose16752-71-9
Average546.3137Da
Monoisotopic546.065191132Da
BASm0034608Deoxyadenosine triphosphateC10H16N5O12P3Chemical structure of Deoxyadenosine triphosphate1927-31-7
Average491.1816Da
Monoisotopic491.000830537Da

Displaying 921–930 of 935 metabolites