Escherichia coli str. K-12 substr. MG1655

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Enterobacteriales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. K-12 substr. MG1655 is a gram-negative, rod-shaped bacterium that thrives at mesophilic temperatures, is categorized as a chemoheterotroph, and is classified as a facultative anaerobe. This versatile organism is found in diverse environments, including the intestines of warm-blooded organisms, soil, and water, illustrating its adaptability to various ecosystems. The gram-negative nature of E. coli K-12 MG1655 is characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, which contributes to its pathogenic potential in some strains. The rod shape of this bacterium allows for efficient motility, facilitated by flagella, enabling it to navigate through various environments. Being a mesophilic organism, it prefers a temperature range of approximately 20-45°C, making it well-suited for survival in the gut of mammals where temperatures are typically around 37°C. As a chemoheterotroph, E. coli K-12 MG1655 derives its energy from the consumption of organic compounds, making it reliant on external sources of carbon for growth and metabolism. This bacterium's facultative anaerobic nature allows it to adapt to both aerobic and anaerobic conditions, enabling it to thrive in the oxygen-rich environment of the intestine and switch to fermentation in low-oxygen scenarios. Beyond its ecological importance, E. coli K-12 MG1655 serves as a cornerstone in molecular biology and biotechnology. It is often employed as a model organism for laboratory studies due to its rapid growth rate, ease of genetic manipulation, and safety compared to pathogenic strains. This strain has significantly contributed to advancements in genetic engineering, synthetic biology, and pharmaceuticals, exemplifying its role as a vital tool in scientific research and industrial applications.

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderEnterobacteriales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainMG1655

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. K-12 substr. MG1655
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. K-12 substr. MG1655

Accession NumberNC_000913.3

Gene Summary

Adenine Count

1142742 bp

Thymine Count

1141382 bp

Guanine Count

1177437 bp

Cytosine Count

1180091 bp

Genome Length

4641652 bp

Protein-coding Genes

4224 genes

Non-Coding Genes

210 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
uncharacterized protein ylchb4588Q47268+572368 - 5724693644.39
Hypothetical proteinb0547Q47269+572466 - 57292117434.0
Nineb0548Q47270+572921 - 5730916494.14
Hypothetical proteinb0549P68662+573084 - 57337410348.6
Holliday junction resolvase rusab0550A1AA51+573371 - 57373313846.7
Hypothetical proteinb4509Q47272+573730 - 5738705493.84
Antitermination protein qb0551Q47274+573956 - 57433914177.3
putative outer membrane porin nmpcb0553P21420-574529 - 57682582394.4
Is5 transposase and trans-activatorb0552Not Available-574737 - 57571737853.6
Putative holinb0554P0A9R3+577398 - 5776137778.49

Displaying genes 11 – 20 of 4434 in total

Pathways

1847 pathways

Metabolites

935 records
Metabolite IDMetabolite nameStructureCAS number
BASm0019712CDP-DG(17:0cycw7c/14:0)C43H77N3O15P2Chemical structure of CDP-DG(17:0cycw7c/14:0)NULL
Average938.043Da
Monoisotopic937.482992787Da
BASm0019722CDP-DG(18:1(11Z)/17:0)C47H85N3O15P2Chemical structure of CDP-DG(18:1(11Z)/17:0)NULL
Average994.151Da
Monoisotopic993.545593045Da
BASm0019733CDP-DG(19:0cycv8c/14:0)C45H81N3O15P2Chemical structure of CDP-DG(19:0cycv8c/14:0)NULL
Average966.097Da
Monoisotopic965.514292916Da
BASm0019750CDP-DG(4:0/16:1(9Z))C32H55N3O15P2Chemical structure of CDP-DG(4:0/16:1(9Z))NULL
Average783.746Da
Monoisotopic783.310842079Da
BASm0019848CL(10:0(3-OH)/10:0/10:0(3-OH)/10:0)C49H94O19P2Chemical structure of CL(10:0(3-OH)/10:0/10:0(3-OH)/10:0)NULL
Average1049.22Da
Monoisotopic1048.586454803Da
BASm0019849CL(10:0(3-OH)/12:0(3-OH)/10:0(3-OH)/12:0(3-OH))C53H102O21P2Chemical structure of CL(10:0(3-OH)/12:0(3-OH)/10:0(3-OH)/12:0(3-OH))NULL
Average1137.326Da
Monoisotopic1136.6388843Da
BASm0019850CL(10:0(3-OH)/12:0/10:0(3-OH)/12:0)C53H102O19P2Chemical structure of CL(10:0(3-OH)/12:0/10:0(3-OH)/12:0)NULL
Average1105.328Da
Monoisotopic1104.64905506Da
BASm0019851CL(10:0(3-OH)/15:0cyclo/10:0(3-OH)/15:0cyclo)C59H110O19P2Chemical structure of CL(10:0(3-OH)/15:0cyclo/10:0(3-OH)/15:0cyclo)NULL
Average1185.458Da
Monoisotopic1184.711655318Da
BASm0019852CL(10:0(3-OH)/16:0/10:0(3-OH)/16:0)C61H118O19P2Chemical structure of CL(10:0(3-OH)/16:0/10:0(3-OH)/16:0)NULL
Average1217.544Da
Monoisotopic1216.774255576Da
BASm0019853CL(10:0(3-OH)/16:1(9Z)/10:0(3-OH)/16:1(9Z))C61H114O19P2Chemical structure of CL(10:0(3-OH)/16:1(9Z)/10:0(3-OH)/16:1(9Z))NULL
Average1213.512Da
Monoisotopic1212.742955447Da

Displaying 861–870 of 935 metabolites